Package: devRate 0.2.4
devRate: Quantify the Relationship Between Development Rate and Temperature in Ectotherms
A set of functions to quantify the relationship between development rate and temperature and to build phenological models. The package comprises a set of models and estimated parameters borrowed from a literature review in ectotherms. The methods and literature review are described in Rebaudo et al. (2018) <doi:10.1111/2041-210X.12935>, Rebaudo and Rabhi (2018) <doi:10.1111/eea.12693>, and Regnier et al. (2021) <doi:10.1093/ee/nvab115>. An example can be found in Rebaudo et al. (2017) <doi:10.1007/s13355-017-0480-5>.
Authors:
devRate_0.2.4.tar.gz
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devRate.pdf |devRate.html✨
devRate/json (API)
NEWS
| # Install 'devRate' in R: |
| install.packages('devRate', repos = c('https://frareb.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/frareb/devrate/issues
- analytis_77 - Analytis equation of development rate as a function of temperature.
- bayoh_03 - Bayoh and Lindsay equation of development rate as a function of temperature.
- beta_16 - Beta2 equation of development rate as a function of temperature.
- beta_95 - Beta equation of development rate as a function of temperature.
- bieri1_83 - Bieri equation 1 of development rate as a function of temperature.
- briere1_99 - Briere et al equation 1 of development rate as a function of temperature.
- briere2_99 - Briere et al equation 2 of development rate as a function of temperature.
- campbell_74 - Campbell et al. equation of development rate as a function of temperature.
- damos_08 - Simplified beta type equation of development rate as a function of temperature.
- damos_11 - Inverse second-order polynomial equation of development rate as a function of temperature.
- davidson_44 - Davidson equation of development rate as a function of temperature.
- devRateEqList - The list of all available equations of development rate as a function of temperature.
- devRateEqStartVal - Default starting values for each equation listed in the devRateEqList object.
- exTropicalMoth - Tropical moth development rate at constant temperatures.
- harcourtYee_82 - Harcourt and Yee equation of development rate as a function of temperature.
- hilbertLogan_83 - Holling type III equation of development rate as a function of temperature.
- janisch_32 - Janisch equation of development rate as a function of temperature (Analytis modification).
- kontodimas_04 - Kontodimas et al. equation of development rate as a function of temperature.
- lactin1_95 - Lactin et al. equation 1 of development rate as a function of temperature.
- lactin2_95 - Lactin et al. equation 2 of development rate as a function of temperature.
- lamb_92 - Lamb equation of development rate as a function of temperature.
- logan10_76 - Logan et al. equation 10 of development rate as a function of temperature.
- logan6_76 - Logan et al. equation 6 of development rate as a function of temperature.
- perf2_11 - Performance-2 equation of development rate as a function of temperature.
- poly2 - Second-order polynomial equation of development rate as a function of temperature.
- poly4 - Fourth-order polynomial equation of development rate as a function of temperature.
- ratkowsky_82 - Ratkowsky equation of development rate as a function of temperature (Shi modification).
- ratkowsky_83 - Ratkowsky equation of development rate as a function of temperature (Shi 2016 modification).
- regniere_12 - Regniere equation of development rate as a function of temperature.
- rootsq_82 - Root square equation of development rate as a function of temperature.
- schoolfieldHigh_81 - Schoolfield et al. equation of development rate as a function of temperature for intermediate to high temperatures only.
- schoolfieldLow_81 - Schoolfield et al. equation of development rate as a function of temperature for intermediate to low temperatures only.
- schoolfield_81 - Schoolfield et al. equation of development rate as a function of temperature.
- sharpeDeMichele_77 - Sharpe and DeMichele equation of development rate as a function of temperature.
- shi_11 - Shi equation of development rate as a function of temperature.
- stinner_74 - Stinner et al equation of development rate as a function of temperature.
- taylor_81 - Taylor equation of development rate as a function of temperature.
- wagner_88 - Hagstrum et Milliken equation of development rate as a function of temperature retrieved from Wagner 1984.
- wang_82 - Wang et al. equation of development rate as a function of temperature.
- wangengel_98 - Wang and Engel equation of development rate as a function of temperature.
Last updated 1 years agofrom:0c08e04563. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 17 2024 |
| R-4.5-win | OK | Oct 17 2024 |
| R-4.5-linux | OK | Oct 17 2024 |
| R-4.4-win | OK | Oct 17 2024 |
| R-4.4-mac | OK | Oct 17 2024 |
| R-4.3-win | OK | Oct 17 2024 |
| R-4.3-mac | OK | Oct 17 2024 |
Exports:devRateFinddevRateIBMdevRateIBMdataBasedevRateIBMgendevRateIBMparamdevRateIBMPlotdevRateInfodevRateMapdevRateModeldevRateModelAlldevRatePlotdevRatePlotInfodevRatePrintdevRateQlBiodevRateQlStatdRGetMetricsdRGetMetricsInfo
Dependencies:
Using devRate package to fit development rate models to an empirical dataset
Rendered fromquickUserGuide.Rmdusingknitr::rmarkdownon Oct 17 2024.Last update: 2020-06-09
Started: 2017-11-02
Guía metodológica para el uso del paquete R devRate
Rendered fromguiaDelUsuario.Rmdusingknitr::rmarkdownon Oct 17 2024.Last update: 2020-06-09
Started: 2018-04-30
Model evaluation
Rendered frommodelEvaluation.Rmdusingknitr::rmarkdownon Oct 17 2024.Last update: 2020-05-19
Started: 2017-11-02
